Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0027200 Exon-Exon chr15:93492182-93496803 chr15:92948952-92953573 342 nt 0.4532
hsa_CHD2_0027300 Exon-Exon chr15:93492182-93498742 chr15:92948952-92955512 432 nt 0.4306
hsa_CHD2_0027400 Exon-Exon chr15:93492182-93515647 chr15:92948952-92972417 1128 nt 0.4317
hsa_CHD2_0027700 Exon-Exon chr15:93492182-93518180 chr15:92948952-92974950 72 nt 0.5139
hsa_CHD2_0027500 Exon-Exon chr15:93492182-93524687 chr15:92948952-92981457 1689 nt 0.4423
hsa_CHD2_0027100 Exon-Exon chr15:93492182-93536228 chr15:92948952-92992998 2218 nt 0.4549
hsa_CHD2_0027800 Intron-Exon-Intron chr15:93493551-93499879 chr15:92950321-92956649 111 nt 0.3694
hsa_CHD2_0027900 Intron-Exon-Intron chr15:93493551-93510743 chr15:92950321-92967513 111 nt 0.3694
hsa_CHD2_0029000 Exon-Exon chr15:93496587-93496803 chr15:92953357-92953573 217 nt 0.4562
hsa_CHD2_0029100 Exon-Exon chr15:93496587-93510627 chr15:92953357-92967397 571 nt 0.4343
Showing 241 to 250 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].