Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0029500 Exon-Exon chr15:93496587-93515157 chr15:92953357-92971927 217 nt 0.4562
hsa_CHD2_0029200 Exon-Exon chr15:93496587-93515647 chr15:92953357-92972417 1003 nt 0.4297
hsa_CHD2_0029600 Exon-Exon chr15:93496587-93521613 chr15:92953357-92978383 72 nt 0.5139
hsa_CHD2_0029300 Exon-Exon chr15:93496587-93522513 chr15:92953357-92979283 1374 nt 0.4491
hsa_CHD2_0029700 Exon-Exon chr15:93496587-93524141 chr15:92953357-92980911 97 nt 0.4021
hsa_CHD2_0029800 Exon-Exon chr15:93496587-93524687 chr15:92953357-92981457 190 nt 0.3895
hsa_CHD2_0029400 Exon-Exon chr15:93496587-93527730 chr15:92953357-92984500 1735 nt 0.4421
hsa_CHD2_0029900 Exon-Exon chr15:93496587-93528903 chr15:92953357-92985673 307 nt 0.4235
hsa_CHD2_0030000 Exon-Exon chr15:93496587-93534747 chr15:92953357-92991517 259 nt 0.4517
hsa_CHD2_0028600 Intron-Exon-Intron chr15:93496587-93539156 chr15:92953357-92995926 250 nt 0.3360
Showing 251 to 260 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].