Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0028700 Exon-Exon chr15:93496587-93540325 chr15:92953357-92997095 2232 nt 0.4521
hsa_CHD2_0028800 Exon-Exon chr15:93496587-93541851 chr15:92953357-92998621 2506 nt 0.4549
hsa_CHD2_0030100 Exon-Exon chr15:93496587-93545547 chr15:92953357-93002317 307 nt 0.4235
hsa_CHD2_0028900 Exon-Exon chr15:93496587-93558139 chr15:92953357-93014909 250 nt 0.3840
hsa_chr15_0374900 Intergenic-Intergenic chr15:93496632-93496785 chr15:92953402-92953555 154 nt 0.4805
hsa_CHD2_0030200 Exon-Exon chr15:93496639-93515647 chr15:92953409-92972417 951 nt 0.4311
hsa_chr15_0375000 Intergenic-Intergenic chr15:93496660-93520017 chr15:92953430-92976787 144 nt 0.4792
hsa_CHD2_0030300 Exon-Exon chr15:93496700-93510627 chr15:92953470-92967397 104 nt 0.4712
hsa_chr15_0375100 Intergenic-Intergenic chr15:93496722-93515582 chr15:92953492-92972352 271 nt 0.4428
hsa_CHD2_0030600 Exon-Exon chr15:93498653-93499879 chr15:92955423-92956649 281 nt 0.4235
Showing 261 to 270 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].