Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0031700 Exon-Exon chr15:93498653-93545547 chr15:92955423-93002317 90 nt 0.3444
hsa_CHD2_0031800 Exon-Exon chr15:93498653-93552553 chr15:92955423-93009323 460 nt 0.4652
hsa_CHD2_0031900 Exon-Exon chr15:93498653-93563488 chr15:92955423-93020258 96 nt 0.3542
hsa_CHD2_0032000 Exon-Exon chr15:93499689-93510627 chr15:92956459-92967397 264 nt 0.4470
hsa_CHD2_0032100 Exon-Exon chr15:93499689-93510743 chr15:92956459-92967513 380 nt 0.4500
hsa_CHD2_0032200 Exon-Exon chr15:93499689-93524141 chr15:92956459-92980911 97 nt 0.4021
hsa_CHD2_0032300 Exon-Exon chr15:93499689-93528903 chr15:92956459-92985673 191 nt 0.4607
hsa_chr15_0375200 Intergenic-Intergenic chr15:93499820-93528868 chr15:92956590-92985638 201 nt 0.5224
hsa_chr15_0375300 Intergenic-Intergenic chr15:93504027-93504202 chr15:92960797-92960972 176 nt 0.5170
hsa_chr15_0375400 Intergenic-Intergenic chr15:93504027-93504451 chr15:92960797-92961221 425 nt 0.4353
Showing 281 to 290 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].