Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0016200 Intron-Exon-Intron chr15:93480748-93493661 chr15:92937518-92950431 2414 nt 0.3956
hsa_CHD2_0016300 Exon-Exon chr15:93480748-93499879 chr15:92937518-92956649 1557 nt 0.4303
hsa_CHD2_0016400 Exon-Exon chr15:93480748-93518180 chr15:92937518-92974950 2134 nt 0.4311
hsa_CHD2_0016500 Exon-Exon chr15:93480748-93534747 chr15:92937518-92991517 250 nt 0.3800
hsa_CHD2_0018100 Exon-Exon chr15:93482808-93489446 chr15:92939578-92946216 826 nt 0.4201
hsa_CHD2_0019400 Exon-Exon chr15:93485052-93498742 chr15:92941822-92955512 1117 nt 0.4190
hsa_CHD2_0019500 Exon-Exon chr15:93485052-93499879 chr15:92941822-92956649 1308 nt 0.4251
hsa_CHD2_0019600 Exon-Exon chr15:93485052-93524687 chr15:92941822-92981457 2374 nt 0.4334
hsa_CHD2_0020100 Exon-Exon chr15:93486073-93489446 chr15:92942843-92946216 551 nt 0.4229
hsa_CHD2_0020200 Exon-Exon chr15:93486073-93541851 chr15:92942843-92998621 250 nt 0.4040
Showing 21 to 30 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].