Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0034700 Exon-Exon chr15:93515495-93524141 chr15:92972265-92980911 621 nt 0.4638
hsa_CHD2_0034800 Exon-Exon chr15:93515495-93534747 chr15:92972265-92991517 218 nt 0.5138
hsa_chr15_0375500 Intergenic-Intergenic chr15:93516409-93516606 chr15:92973179-92973376 198 nt 0.3636
hsa_CHD2_0035000 Exon-Exon chr15:93518109-93522513 chr15:92974879-92979283 72 nt 0.5139
hsa_CHD2_0035100 Exon-Exon chr15:93518109-93524141 chr15:92974879-92980911 247 nt 0.4777
hsa_CHD2_0035200 Exon-Exon chr15:93518109-93524687 chr15:92974879-92981457 339 nt 0.4248
hsa_CHD2_0035300 Exon-Exon chr15:93518109-93527730 chr15:92974879-92984500 72 nt 0.5139
hsa_CHD2_0035400 Exon-Exon chr15:93518109-93528903 chr15:92974879-92985673 398 nt 0.5276
hsa_CHD2_0035500 Intron-Exon-Intron chr15:93518109-93528941 chr15:92974879-92985711 214 nt 0.5234
hsa_CHD2_0035600 Exon-Exon chr15:93518109-93536228 chr15:92974879-92992998 72 nt 0.5139
Showing 311 to 320 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].