Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0035700 Exon-Exon chr15:93518109-93540325 chr15:92974879-92997095 72 nt 0.5139
hsa_CHD2_0035800 Exon-Exon chr15:93518109-93541851 chr15:92974879-92998621 123 nt 0.5447
hsa_CHD2_0034900 Exon-Exon chr15:93518109-93552553 chr15:92974879-93009323 2087 nt 0.4672
hsa_CHD2_0035900 Exon-Exon chr15:93518109-93557956 chr15:92974879-93014726 131 nt 0.3893
hsa_CHD2_0036000 Exon-Exon chr15:93518109-93558139 chr15:92974879-93014909 72 nt 0.5139
hsa_CHD2_0036100 Exon-Exon chr15:93518109-93567957 chr15:92974879-93024727 72 nt 0.5139
hsa_CHD2_0036200 Exon-Exon chr15:93518109-93568021 chr15:92974879-93024791 222 nt 0.5225
hsa_CHD2_0036300 Intron-Exon-Intron chr15:93520080-93523319 chr15:92976850-92980089 2489 nt 0.3949
hsa_CHD2_0036600 Intron-Exon-Intron chr15:93521378-93522513 chr15:92978148-92979283 149 nt 0.4698
hsa_CHD2_0036700 Intron-Exon-Intron chr15:93521378-93522536 chr15:92978148-92979306 153 nt 0.4967
Showing 321 to 330 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].