Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0036800 Intron-Exon-Intron chr15:93521378-93524687 chr15:92978148-92981457 236 nt 0.4915
hsa_CHD2_0036500 Intron-Exon-Intron chr15:93521378-93527730 chr15:92978148-92984500 746 nt 0.4504
hsa_CHD2_0036900 Intron-Exon-Intron chr15:93521378-93528903 chr15:92978148-92985673 561 nt 0.4991
hsa_CHD2_0037000 Intron-Exon-Intron chr15:93521378-93534747 chr15:92978148-92991517 48 nt 0.4375
hsa_CHD2_0037100 Intron-Exon-Intron chr15:93521378-93545547 chr15:92978148-93002317 141 nt 0.3546
hsa_CHD2_0037200 Intron-Exon-Intron chr15:93521378-93547981 chr15:92978148-93004751 236 nt 0.4915
hsa_CHD2_0037300 Intron-Exon-Intron chr15:93521378-93552553 chr15:92978148-93009323 236 nt 0.4915
hsa_CHD2_0037400 Intron-Exon-Intron chr15:93521378-93558139 chr15:92978148-93014909 220 nt 0.5182
hsa_CHD2_0037800 Intron-Exon-Intron chr15:93521464-93522536 chr15:92978234-92979306 322 nt 0.5000
hsa_CHD2_0037900 Exon-Exon chr15:93521464-93524687 chr15:92978234-92981457 489 nt 0.4560
Showing 331 to 340 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].