Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0039100 Exon-Exon chr15:93522365-93534747 chr15:92979135-92991517 42 nt 0.4286
hsa_CHD2_0039200 Exon-Exon chr15:93522365-93536228 chr15:92979135-92992998 146 nt 0.5137
hsa_CHD2_0039300 Exon-Exon chr15:93522365-93540633 chr15:92979135-92997403 157 nt 0.4140
hsa_CHD2_0039400 Intron-Intron chr15:93523046-93523369 chr15:92979816-92980139 324 nt 0.4105
hsa_CHD2_0039700 Exon-Exon chr15:93524045-93528903 chr15:92980815-92985673 103 nt 0.4175
hsa_CHD2_0039800 Exon-Exon chr15:93524045-93536228 chr15:92980815-92992998 146 nt 0.5205
hsa_CHD2_0039900 Exon-Exon chr15:93524045-93541851 chr15:92980815-92998621 123 nt 0.5447
hsa_CHD2_0040000 Exon-Exon chr15:93524068-93527730 chr15:92980838-92984500 338 nt 0.4260
hsa_CHD2_0040100 Intron-Exon-Intron chr15:93524542-93540633 chr15:92981312-92997403 965 nt 0.4518
hsa_CHD2_0040200 Exon-Exon chr15:93524595-93527730 chr15:92981365-92984500 171 nt 0.4444
Showing 351 to 360 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].