Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0040300 Exon-Exon chr15:93524595-93528903 chr15:92981365-92985673 93 nt 0.3763
hsa_CHD2_0040400 Exon-Exon chr15:93524595-93534747 chr15:92981365-92991517 311 nt 0.4727
hsa_CHD2_0040500 Exon-Exon chr15:93524595-93536228 chr15:92981365-92992998 182 nt 0.5055
hsa_CHD2_0040600 Exon-Exon chr15:93524595-93540325 chr15:92981365-92997095 93 nt 0.3763
hsa_CHD2_0040700 Intron-Intron chr15:93525024-93525355 chr15:92981794-92982125 332 nt 0.3645
hsa_CHD2_0040800 Intron-Intron chr15:93525024-93525415 chr15:92981794-92982185 392 nt 0.3827
hsa_CHD2_0040900 Intron-Intron chr15:93525541-93525699 chr15:92982311-92982469 159 nt 0.4717
hsa_CHD2_0041000 Intron-Exon chr15:93527027-93540239 chr15:92983797-92997009 90 nt 0.4778
hsa_CHD2_0041100 Exon-Exon chr15:93527560-93534747 chr15:92984330-92991517 389 nt 0.4833
hsa_CHD2_0041200 Exon-Exon chr15:93527560-93536228 chr15:92984330-92992998 146 nt 0.5342
Showing 361 to 370 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].