Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0042300 Exon-Exon chr15:93528728-93545547 chr15:92985498-93002317 1041 nt 0.4621
hsa_CHD2_0042500 Exon-Exon chr15:93528728-93547981 chr15:92985498-93004751 311 nt 0.5048
hsa_CHD2_0042600 Intron-Exon-Intron chr15:93532975-93536228 chr15:92989745-92992998 146 nt 0.5342
hsa_CHD2_0042700 Intron-Exon-Intron chr15:93534577-93547981 chr15:92991347-93004751 84 nt 0.3690
hsa_CHD2_0043200 Intron-Exon-Intron chr15:93534706-93535063 chr15:92991476-92991833 183 nt 0.3825
hsa_CHD2_0043300 Intron-Exon-Intron chr15:93534706-93535220 chr15:92991476-92991990 108 nt 0.3611
hsa_CHD2_0043000 Intron-Exon-Intron chr15:93534706-93539156 chr15:92991476-92995926 250 nt 0.3520
hsa_CHD2_0043400 Exon-Exon chr15:93534706-93540325 chr15:92991476-92997095 181 nt 0.4088
hsa_CHD2_0043500 Exon-Exon chr15:93534706-93540633 chr15:92991476-92997403 321 nt 0.4611
hsa_CHD2_0043600 Exon-Exon chr15:93534706-93541851 chr15:92991476-92998621 444 nt 0.4842
Showing 381 to 390 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].