Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0020900 Exon-Exon chr15:93487645-93489446 chr15:92944415-92946216 325 nt 0.4185
hsa_CHD2_0021000 Exon-Exon chr15:93487645-93510743 chr15:92944415-92967513 1137 nt 0.4336
hsa_CHD2_0022900 Exon-Exon chr15:93489051-93489446 chr15:92945821-92946216 224 nt 0.4420
hsa_CHD2_0023000 Exon-Exon chr15:93489051-93510743 chr15:92945821-92967513 1036 nt 0.4402
hsa_CHD2_0025200 Intron-Exon chr15:93489478-93492306 chr15:92946248-92949076 2829 nt 0.4203
hsa_CHD2_0026700 Exon-Exon chr15:93492182-93499879 chr15:92948952-92956649 623 nt 0.4398
hsa_CHD2_0026800 Exon-Exon chr15:93492182-93510743 chr15:92948952-92967513 812 nt 0.4397
hsa_CHD2_0026900 Exon-Exon chr15:93492182-93541851 chr15:92948952-92998621 2631 nt 0.4546
hsa_CHD2_0027000 Exon-Exon chr15:93492182-93558139 chr15:92948952-93014909 250 nt 0.3760
hsa_CHD2_0028000 Exon-Exon chr15:93496587-93498742 chr15:92953357-92955512 307 nt 0.4235
Showing 31 to 40 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].