Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0043700 Exon-Exon chr15:93534706-93545547 chr15:92991476-93002317 323 nt 0.4396
hsa_CHD2_0043800 Exon-Exon chr15:93534706-93547981 chr15:92991476-93004751 188 nt 0.5000
hsa_CHD2_0043900 Exon-Exon chr15:93534706-93558139 chr15:92991476-93014909 256 nt 0.5039
hsa_CHD2_0044000 Exon-Exon chr15:93534706-93563488 chr15:92991476-93020258 289 nt 0.5121
hsa_CHD2_0043100 Exon-Exon chr15:93534706-93568290 chr15:92991476-93025060 2429 nt 0.4821
hsa_CHD2_0044200 Intron-Exon-Intron chr15:93536089-93539156 chr15:92992859-92995926 250 nt 0.3720
hsa_CHD2_0044500 Exon-Exon chr15:93536089-93540325 chr15:92992859-92997095 140 nt 0.5286
hsa_CHD2_0044400 Exon-Exon chr15:93536089-93540633 chr15:92992859-92997403 430 nt 0.4512
hsa_CHD2_0044600 Intron-Exon-Intron chr15:93536089-93541491 chr15:92992859-92998261 113 nt 0.5575
hsa_CHD2_0044700 Exon-Exon chr15:93536089-93545547 chr15:92992859-93002317 141 nt 0.3546
Showing 391 to 400 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].