Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0044800 Exon-Exon chr15:93536089-93552553 chr15:92992859-93009323 314 nt 0.5032
hsa_CHD2_0044300 Exon-Exon chr15:93536089-93568290 chr15:92992859-93025060 2387 nt 0.4830
hsa_CHD2_0044900 Exon-Intron chr15:93536192-93541491 chr15:92992962-92998261 113 nt 0.5575
hsa_CHD2_0045000 Exon-Exon chr15:93536202-93540633 chr15:92992972-92997403 178 nt 0.4382
hsa_CHD2_0045100 Intron-Exon-Intron chr15:93538983-93541491 chr15:92995753-92998261 113 nt 0.5575
hsa_CHD2_0045200 Intron-Exon-Intron chr15:93538983-93541851 chr15:92995753-92998621 1730 nt 0.4139
hsa_CHD2_0045300 Intron-Exon-Intron chr15:93538983-93552553 chr15:92995753-93009323 309 nt 0.4239
hsa_CHD2_0045400 Intron-Exon-Intron chr15:93538983-93558139 chr15:92995753-93014909 100 nt 0.3500
hsa_CHD2_0045900 Exon-Exon chr15:93540187-93540633 chr15:92996957-92997403 290 nt 0.4138
hsa_CHD2_0046000 Exon-Exon chr15:93540187-93543870 chr15:92996957-93000640 419 nt 0.4248
Showing 401 to 410 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].