Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0046100 Exon-Exon chr15:93540187-93547981 chr15:92996957-93004751 290 nt 0.4138
hsa_CHD2_0046200 Exon-Exon chr15:93540187-93552553 chr15:92996957-93009323 576 nt 0.4878
hsa_CHD2_0046300 Exon-Exon chr15:93540187-93555674 chr15:92996957-93012444 145 nt 0.4069
hsa_CHD2_0046400 Exon-Exon chr15:93540187-93563488 chr15:92996957-93020258 341 nt 0.5191
hsa_CHD2_0045800 Exon-Exon chr15:93540187-93568688 chr15:92996957-93025458 2645 nt 0.4881
hsa_CHD2_0046500 Exon-Exon chr15:93540211-93541851 chr15:92996981-92998621 123 nt 0.5447
hsa_CHD2_0046600 Exon-Exon chr15:93540483-93540633 chr15:92997253-92997403 151 nt 0.4238
hsa_CHD2_0046700 Exon-Exon chr15:93540483-93545547 chr15:92997253-93002317 141 nt 0.3546
hsa_CHD2_0046800 Exon-Exon chr15:93540483-93555674 chr15:92997253-93012444 100 nt 0.3500
hsa_CHD2_0046900 Intron-Exon-Intron chr15:93541408-93541851 chr15:92998178-92998621 207 nt 0.5411
Showing 411 to 420 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].