Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0047000 Exon-Exon chr15:93541729-93555674 chr15:92998499-93012444 402 nt 0.4900
hsa_CHD2_0047100 Exon-Exon chr15:93541729-93558139 chr15:92998499-93014909 123 nt 0.5447
hsa_CHD2_0047200 Exon-Exon chr15:93541729-93563488 chr15:92998499-93020258 314 nt 0.5064
hsa_CHD2_0047300 Intron-Exon-Intron chr15:93543404-93544193 chr15:93000174-93000963 790 nt 0.4025
hsa_CHD2_0047400 Intron-Intron chr15:93543432-93543601 chr15:93000202-93000371 170 nt 0.4118
hsa_CHD2_0047900 Intron-Exon-Intron chr15:93543742-93543992 chr15:93000512-93000762 251 nt 0.3904
hsa_CHD2_0048000 Exon-Exon chr15:93543742-93545547 chr15:93000512-93002317 270 nt 0.4000
hsa_CHD2_0048100 Exon-Exon chr15:93543742-93563488 chr15:93000512-93020258 866 nt 0.4758
hsa_CHD2_0048200 Exon-Exon chr15:93543742-93568688 chr15:93000512-93025458 48 nt 0.5833
hsa_CHD2_0048300 Exon-Exon chr15:93543778-93545547 chr15:93000548-93002317 234 nt 0.3889
Showing 421 to 430 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].