Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0048400 Exon-Exon chr15:93545407-93545547 chr15:93002177-93002317 141 nt 0.3546
hsa_CHD2_0048500 Intron-Exon-Intron chr15:93545407-93545656 chr15:93002177-93002426 250 nt 0.3760
hsa_CHD2_0048600 Intron-Exon-Intron chr15:93545407-93546418 chr15:93002177-93003188 1012 nt 0.3686
hsa_CHD2_0048700 Exon-Exon chr15:93545407-93547981 chr15:93002177-93004751 276 nt 0.4094
hsa_CHD2_0048800 Exon-Exon chr15:93545407-93552553 chr15:93002177-93009323 455 nt 0.4571
hsa_CHD2_0049000 Exon-Exon chr15:93545407-93555674 chr15:93002177-93012444 147 nt 0.3605
hsa_CHD2_0049100 Exon-Exon chr15:93545407-93558139 chr15:93002177-93014909 669 nt 0.4768
hsa_CHD2_0049200 Exon-Exon chr15:93545407-93563488 chr15:93002177-93020258 602 nt 0.4834
hsa_CHD2_0048900 Exon-Exon chr15:93545407-93568021 chr15:93002177-93024791 1436 nt 0.4798
hsa_CHD2_0049300 Exon-Exon chr15:93545476-93555674 chr15:93002246-93012444 486 nt 0.4486
Showing 431 to 440 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].