Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0050600 Intron-Intron chr15:93548246-93548665 chr15:93005016-93005435 420 nt 0.4905
hsa_CHD2_0050700 Intron-Exon chr15:93551673-93563488 chr15:93008443-93020258 1442 nt 0.4688
hsa_CHD2_0051300 Exon-Exon chr15:93552531-93555674 chr15:93009301-93012444 123 nt 0.3821
hsa_CHD2_0051400 Exon-Exon chr15:93552531-93563440 chr15:93009301-93020210 23 nt 0.5217
hsa_CHD2_0051500 Exon-Exon chr15:93555575-93558139 chr15:93012345-93014909 314 nt 0.4650
hsa_CHD2_0051600 Exon-Exon chr15:93555575-93563488 chr15:93012345-93020258 439 nt 0.4738
hsa_CHD2_0051700 Intron-Intron chr15:93556934-93557094 chr15:93013704-93013864 161 nt 0.5652
hsa_chr15_0375600 Intergenic-Intergenic chr15:93558024-93567811 chr15:93014794-93024581 116 nt 0.5086
hsa_CHD2_0052000 Exon-Exon chr15:93558049-93563488 chr15:93014819-93020258 247 nt 0.5263
hsa_CHD2_0052100 Exon-Exon chr15:93558079-93568021 chr15:93014849-93024791 308 nt 0.5097
Showing 451 to 460 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].