Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0052200 Intron-Intron chr15:93559948-93560603 chr15:93016718-93017373 656 nt 0.3918
hsa_CHD2_0052300 Intron-Intron chr15:93562603-93562852 chr15:93019373-93019622 250 nt 0.3680
hsa_CHD2_0052400 Exon-Exon chr15:93563242-93563488 chr15:93020012-93020258 247 nt 0.5263
hsa_CHD2_0052500 Exon-Exon chr15:93563318-93563488 chr15:93020088-93020258 171 nt 0.5322
hsa_CHD2_0052600 Exon-Exon chr15:93567602-93568021 chr15:93024372-93024791 420 nt 0.4881
hsa_CHD2_0052700 Exon-Exon chr15:93567866-93568318 chr15:93024636-93025088 453 nt 0.4967
hsa_chr15_0375700 Intergenic-Intergenic chr15:93568040-93568307 chr15:93024810-93025077 268 nt 0.5485
hsa_CHD2_0052800 Exon-Exon chr15:93568794-93568964 chr15:93025564-93025734 171 nt 0.5497
hsa_CHD2_0052900 Exon-Exon chr15:93568927-93569091 chr15:93025697-93025861 165 nt 0.4970
hsa_CHD2_0053000 Exon-Exon chr15:93569758-93570444 chr15:93026528-93027214 687 nt 0.4818
Showing 461 to 470 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].