Basic Information

Symbol
circCHD2
RNA Class
circRNA
Alias
Chromodomain Helicase DNA Binding Protein 2 Chromodomain-Helicase-DNA-Binding Protein 2 ATP-Dependent Helicase CHD2 DKFZp686E01200 DKFZp547I1315 DKFZp781D1727 FLJ38614 CHD-2 EC 3.6.4.- EC 3.6.1 DEE94 EEOC
Location (GRCh37)
15:93428745-93570444 UCSC Genome Browser
Location (GRCh38)
15:92885515-93027214
UCSC Genome Browser Search in Marker Scope
Host gene
CHD2
Host category
mRNA
Forensic tag(s)
Cause of death analysis
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_CHD2_0001700 Intergenic-Exon chr15:93429399-93518180 chr15:92886169-92974950 72 nt 0.5139
hsa_CHD2_0001800 Intergenic-Exon chr15:93429399-93528903 chr15:92886169-92985673 86 nt 0.3488
hsa_CHD2_0001900 Intergenic-Exon chr15:93429399-93568021 chr15:92886169-93024791 155 nt 0.3548
hsa_CHD2_0002200 Exon-Intergenic chr15:93435234-93498742 chr15:92892004-92955512 250 nt 0.2840
hsa_CHD2_0002700 Intergenic-Exon chr15:93435234-93518180 chr15:92892004-92974950 72 nt 0.5139
hsa_CHD2_0002400 Intergenic-Exon chr15:93435234-93536228 chr15:92892004-92992998 250 nt 0.3360
hsa_CHD2_0003200 Exon-Exon chr15:93443556-93485185 chr15:92900326-92941955 1396 nt 0.4527
hsa_CHD2_0003500 Exon-Exon chr15:93444016-93467782 chr15:92900786-92924552 172 nt 0.4186
hsa_CHD2_0003300 Exon-Exon chr15:93444016-93470560 chr15:92900786-92927330 491 nt 0.4725
hsa_CHD2_0003400 Exon-Exon chr15:93444016-93472321 chr15:92900786-92929091 553 nt 0.4792
Showing 81 to 90 of 472 entries
Forensic Context

A study in humans demonstrated that the circCHD2 was significantly more abundant in CD14+ monocytes from critically ill patients with sepsis due to community-acquired pneumonia compared to healthy subjects. This circular RNA was resistant to RNase R digestion, confirming its circular nature, and its expression was not induced by ex vivo stimulation of healthy monocytes with bacterial components [Khan et al. DOI:10.1186/s13054-020-03146-4].