Basic Information

Symbol
circACTN4
RNA Class
circRNA
Alias
Actinin Alpha 4 Focal Segmental Glomerulosclerosis 1 Non-Muscle Alpha-Actinin 4 Alpha-Actinin-4 FSGS1 ACTININ-4 FSGS
Location (GRCh37)
19:39110977-39221171 UCSC Genome Browser
Location (GRCh38)
19:38620337-38730531
UCSC Genome Browser Search in Marker Scope
Host gene
ACTN4
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ACTN4_0000200 Intergenic-Exon chr19:39138267-39212518 chr19:38647627-38721878 1751 nt 0.6094
hsa_ACTN4_0000300 Intergenic-Exon chr19:39138267-39219794 chr19:38647627-38729154 2696 nt 0.6061
hsa_ACTN4_0002800 Exon-Exon chr19:39191240-39191761 chr19:38700600-38701121 235 nt 0.5532
hsa_ACTN4_0002900 Exon-Exon chr19:39191240-39200116 chr19:38700600-38709476 571 nt 0.5412
hsa_ACTN4_0003000 Exon-Exon chr19:39191240-39200982 chr19:38700600-38710342 657 nt 0.5434
hsa_ACTN4_0003500 Exon-Exon chr19:39191642-39212518 chr19:38701002-38721878 1355 nt 0.5875
hsa_ACTN4_0003800 Exon-Exon chr19:39195574-39195660 chr19:38704934-38705020 87 nt 0.5287
hsa_ACTN4_0003900 Intron-Exon-Intron chr19:39195574-39196989 chr19:38704934-38706349 393 nt 0.5623
hsa_ACTN4_0004000 Exon-Exon chr19:39195574-39205201 chr19:38704934-38714561 515 nt 0.5456
hsa_ACTN4_0004200 Exon-Exon chr19:39196684-39200116 chr19:38706044-38709476 249 nt 0.5341
Showing 1 to 10 of 114 entries
Forensic Context

A study in humans demonstrated that the circACTN4 recruits YBX1 to the FZD7 promoter, forming circRNA-protein-chromatin complexes to coactivate FZD7 transcription, identifying it as a biomarker for cancer [Misir et al. DOI:10.1038/s41418-022-00948-7].