Basic Information

Symbol
circACTN4
RNA Class
circRNA
Alias
Actinin Alpha 4 Focal Segmental Glomerulosclerosis 1 Non-Muscle Alpha-Actinin 4 Alpha-Actinin-4 FSGS1 ACTININ-4 FSGS
Location (GRCh37)
19:39110977-39221171 UCSC Genome Browser
Location (GRCh38)
19:38620337-38730531
UCSC Genome Browser Search in Marker Scope
Host gene
ACTN4
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ACTN4_0007200 Intron-Intron chr19:39213071-39213323 chr19:38722431-38722683 253 nt 0.6087
hsa_ACTN4_0007400 Exon-Exon chr19:39214254-39217743 chr19:38723614-38727103 895 nt 0.6011
hsa_chr19_0223200 Intergenic-Intergenic chr19:39214273-39214675 chr19:38723633-38724035 99 nt 0.6061
hsa_ACTN4_0007500 Intron-Exon-Intron chr19:39214471-39215614 chr19:38723831-38724974 974 nt 0.6150
hsa_chr19_0223300 Intergenic-Intergenic chr19:39214616-39216420 chr19:38723976-38725780 57 nt 0.6140
hsa_ACTN4_0007700 Exon-Exon chr19:39214661-39216543 chr19:38724021-38725903 237 nt 0.5654
hsa_ACTN4_0007800 Exon-Exon chr19:39214928-39216543 chr19:38724288-38725903 367 nt 0.5940
hsa_chr19_0223400 Intergenic-Intergenic chr19:39214932-39220170 chr19:38724292-38729530 1007 nt 0.6187
hsa_ACTN4_0008200 Exon-Exon chr19:39216364-39217743 chr19:38725724-38727103 327 nt 0.5963
hsa_ACTN4_0008300 Exon-Exon chr19:39216499-39217653 chr19:38725859-38727013 45 nt 0.5111
Showing 91 to 100 of 114 entries
Forensic Context

A study in humans demonstrated that the circACTN4 recruits YBX1 to the FZD7 promoter, forming circRNA-protein-chromatin complexes to coactivate FZD7 transcription, identifying it as a biomarker for cancer [Misir et al. DOI:10.1038/s41418-022-00948-7].