Basic Information

Symbol
circACTN4
RNA Class
circRNA
Alias
Actinin Alpha 4 Focal Segmental Glomerulosclerosis 1 Non-Muscle Alpha-Actinin 4 Alpha-Actinin-4 FSGS1 ACTININ-4 FSGS
Location (GRCh37)
19:39110977-39221171 UCSC Genome Browser
Location (GRCh38)
19:38620337-38730531
UCSC Genome Browser Search in Marker Scope
Host gene
ACTN4
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr19_0223500 Intergenic-Intergenic chr19:39216517-39217668 chr19:38725877-38727028 99 nt 0.5758
hsa_chr19_0223600 Intergenic-Intergenic chr19:39217644-39219769 chr19:38727004-38729129 81 nt 0.6790
hsa_ACTN4_0008500 Intron-Intron chr19:39217744-39218490 chr19:38727104-38727850 747 nt 0.6386
hsa_ACTN4_0008600 Exon-Exon chr19:39218956-39219794 chr19:38728316-38729154 225 nt 0.5778
hsa_chr19_0223700 Intergenic-Intergenic chr19:39219734-39220527 chr19:38729094-38729887 61 nt 0.5902
hsa_ACTN4_0008700 Exon-Exon chr19:39220074-39220428 chr19:38729434-38729788 355 nt 0.6113
hsa_chr19_0223800 Intergenic-Intergenic chr19:39220085-39220656 chr19:38729445-38730016 572 nt 0.6294
hsa_ACTN4_0008800 Exon-Exon chr19:39220220-39220408 chr19:38729580-38729768 189 nt 0.5714
hsa_ACTN4_0008900 Exon-Exon chr19:39220256-39220428 chr19:38729616-38729788 173 nt 0.5607
hsa_ACTN4_0009000 Exon-Exon chr19:39220270-39220408 chr19:38729630-38729768 139 nt 0.5540
Showing 101 to 110 of 114 entries
Forensic Context

A study in humans demonstrated that the circACTN4 recruits YBX1 to the FZD7 promoter, forming circRNA-protein-chromatin complexes to coactivate FZD7 transcription, identifying it as a biomarker for cancer [Misir et al. DOI:10.1038/s41418-022-00948-7].