Basic Information

Symbol
circACTN4
RNA Class
circRNA
Alias
Actinin Alpha 4 Focal Segmental Glomerulosclerosis 1 Non-Muscle Alpha-Actinin 4 Alpha-Actinin-4 FSGS1 ACTININ-4 FSGS
Location (GRCh37)
19:39110977-39221171 UCSC Genome Browser
Location (GRCh38)
19:38620337-38730531
UCSC Genome Browser Search in Marker Scope
Host gene
ACTN4
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ACTN4_0007300 Exon-Exon chr19:39214254-39219794 chr19:38723614-38729154 1135 nt 0.6053
hsa_ACTN4_0007600 Exon-Exon chr19:39214577-39221171 chr19:38723937-38730531 2284 nt 0.5714
hsa_ACTN4_0007900 Exon-Exon chr19:39215071-39215205 chr19:38724431-38724565 135 nt 0.6370
hsa_ACTN4_0008000 Exon-Exon chr19:39215071-39216543 chr19:38724431-38725903 315 nt 0.6000
hsa_ACTN4_0008100 Exon-Exon chr19:39215071-39221171 chr19:38724431-38730531 1960 nt 0.5673
hsa_ACTN4_0008400 Exon-Exon chr19:39217654-39218648 chr19:38727014-38728008 153 nt 0.6405
hsa_CAPN12_0000100 Intergenic-Exon chr19:39220085-39220944 chr19:38729445-38730304 860 nt 0.5291
hsa_CAPN12_0000200 Intergenic-Exon chr19:39220522-39220887 chr19:38729882-38730247 366 nt 0.4317
hsa_CAPN12_0000300 Intergenic-Exon chr19:39220528-39221024 chr19:38729888-38730384 497 nt 0.4789
hsa_CAPN12_0000400 Intergenic-Exon chr19:39220607-39220994 chr19:38729967-38730354 388 nt 0.4253
Showing 21 to 30 of 114 entries
Forensic Context

A study in humans demonstrated that the circACTN4 recruits YBX1 to the FZD7 promoter, forming circRNA-protein-chromatin complexes to coactivate FZD7 transcription, identifying it as a biomarker for cancer [Misir et al. DOI:10.1038/s41418-022-00948-7].