Basic Information

Symbol
circACTN4
RNA Class
circRNA
Alias
Actinin Alpha 4 Focal Segmental Glomerulosclerosis 1 Non-Muscle Alpha-Actinin 4 Alpha-Actinin-4 FSGS1 ACTININ-4 FSGS
Location (GRCh37)
19:39110977-39221171 UCSC Genome Browser
Location (GRCh38)
19:38620337-38730531
UCSC Genome Browser Search in Marker Scope
Host gene
ACTN4
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ACTN4_0000400 Exon-Exon chr19:39138376-39191679 chr19:38647736-38701039 38 nt 0.6316
hsa_ACTN4_0000500 Exon-Exon chr19:39138488-39191354 chr19:38647848-38700714 121 nt 0.5702
hsa_ACTN4_0000600 Intron-Intron chr19:39139225-39186104 chr19:38648585-38695464 250 nt 0.4160
hsa_ACTN4_0000700 Intron-Intron chr19:39139531-39140050 chr19:38648891-38649410 520 nt 0.5423
hsa_ACTN4_0000800 Intron-Intron chr19:39139696-39139898 chr19:38649056-38649258 203 nt 0.5517
hsa_ACTN4_0000900 Intron-Exon-Intron chr19:39139739-39196925 chr19:38649099-38706285 357 nt 0.5490
hsa_chr19_0222200 Intergenic-Intergenic chr19:39140584-39151784 chr19:38649944-38661144 250 nt 0.4000
hsa_ACTN4_0001000 Intron-Intron chr19:39142585-39144988 chr19:38651945-38654348 2404 nt 0.4551
hsa_ACTN4_0001100 Intron-Intron chr19:39142652-39144925 chr19:38652012-38654285 2274 nt 0.4472
hsa_ACTN4_0001200 Intron-Intron chr19:39143060-39143596 chr19:38652420-38652956 537 nt 0.5493
Showing 31 to 40 of 114 entries
Forensic Context

A study in humans demonstrated that the circACTN4 recruits YBX1 to the FZD7 promoter, forming circRNA-protein-chromatin complexes to coactivate FZD7 transcription, identifying it as a biomarker for cancer [Misir et al. DOI:10.1038/s41418-022-00948-7].