Basic Information

Symbol
circACTN4
RNA Class
circRNA
Alias
Actinin Alpha 4 Focal Segmental Glomerulosclerosis 1 Non-Muscle Alpha-Actinin 4 Alpha-Actinin-4 FSGS1 ACTININ-4 FSGS
Location (GRCh37)
19:39110977-39221171 UCSC Genome Browser
Location (GRCh38)
19:38620337-38730531
UCSC Genome Browser Search in Marker Scope
Host gene
ACTN4
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ACTN4_0001300 Intron-Intron chr19:39157620-39157759 chr19:38666980-38667119 140 nt 0.3357
hsa_chr19_0222300 Intergenic-Intergenic chr19:39160238-39161091 chr19:38669598-38670451 854 nt 0.5269
hsa_ACTN4_0001400 Intron-Intron chr19:39161461-39162975 chr19:38670821-38672335 1515 nt 0.4488
hsa_ACTN4_0001500 Intron-Intron chr19:39161471-39162975 chr19:38670831-38672335 1505 nt 0.4472
hsa_ACTN4_0001600 Intron-Intron chr19:39161499-39162936 chr19:38670859-38672296 1438 nt 0.4402
hsa_ACTN4_0001700 Intron-Intron chr19:39164698-39181779 chr19:38674058-38691139 250 nt 0.3800
hsa_chr19_0222400 Intergenic-Intergenic chr19:39166629-39167347 chr19:38675989-38676707 719 nt 0.5035
hsa_ACTN4_0001800 Intron-Intron chr19:39168645-39171471 chr19:38678005-38680831 2827 nt 0.4889
hsa_ACTN4_0001900 Intron-Intron chr19:39171031-39171552 chr19:38680391-38680912 522 nt 0.5057
hsa_ACTN4_0002000 Intron-Intron chr19:39181357-39181779 chr19:38690717-38691139 423 nt 0.4137
Showing 41 to 50 of 114 entries
Forensic Context

A study in humans demonstrated that the circACTN4 recruits YBX1 to the FZD7 promoter, forming circRNA-protein-chromatin complexes to coactivate FZD7 transcription, identifying it as a biomarker for cancer [Misir et al. DOI:10.1038/s41418-022-00948-7].