Basic Information

Symbol
circACTN4
RNA Class
circRNA
Alias
Actinin Alpha 4 Focal Segmental Glomerulosclerosis 1 Non-Muscle Alpha-Actinin 4 Alpha-Actinin-4 FSGS1 ACTININ-4 FSGS
Location (GRCh37)
19:39110977-39221171 UCSC Genome Browser
Location (GRCh38)
19:38620337-38730531
UCSC Genome Browser Search in Marker Scope
Host gene
ACTN4
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ACTN4_0002100 Intron-Intron chr19:39182451-39184994 chr19:38691811-38694354 2544 nt 0.5578
hsa_ACTN4_0002200 Intron-Exon-Intron chr19:39186596-39205201 chr19:38695956-38714561 175 nt 0.5600
hsa_ACTN4_0002300 Intron-Exon-Intron chr19:39187668-39196771 chr19:38697028-38706131 250 nt 0.4200
hsa_ACTN4_0002400 Intron-Exon-Intron chr19:39187668-39200116 chr19:38697028-38709476 250 nt 0.4120
hsa_ACTN4_0002500 Intron-Intron chr19:39189041-39190038 chr19:38698401-38699398 998 nt 0.5862
hsa_ACTN4_0002600 Intron-Intron chr19:39190677-39191174 chr19:38700037-38700534 498 nt 0.5863
hsa_ACTN4_0002700 Intron-Intron chr19:39190863-39191153 chr19:38700223-38700513 291 nt 0.5670
hsa_ACTN4_0003300 Exon-Exon chr19:39191240-39196771 chr19:38700600-38706131 94 nt 0.5319
hsa_ACTN4_0003100 Exon-Exon chr19:39191240-39198835 chr19:38700600-38708195 489 nt 0.5419
hsa_ACTN4_0003200 Intron-Exon-Intron chr19:39191240-39202001 chr19:38700600-38711361 1676 nt 0.5650
Showing 51 to 60 of 114 entries
Forensic Context

A study in humans demonstrated that the circACTN4 recruits YBX1 to the FZD7 promoter, forming circRNA-protein-chromatin complexes to coactivate FZD7 transcription, identifying it as a biomarker for cancer [Misir et al. DOI:10.1038/s41418-022-00948-7].