Basic Information

Symbol
circACTN4
RNA Class
circRNA
Alias
Actinin Alpha 4 Focal Segmental Glomerulosclerosis 1 Non-Muscle Alpha-Actinin 4 Alpha-Actinin-4 FSGS1 ACTININ-4 FSGS
Location (GRCh37)
19:39110977-39221171 UCSC Genome Browser
Location (GRCh38)
19:38620337-38730531
UCSC Genome Browser Search in Marker Scope
Host gene
ACTN4
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ACTN4_0003400 Exon-Exon chr19:39191240-39217743 chr19:38700600-38727103 147 nt 0.6259
hsa_ACTN4_0003600 Exon-Exon chr19:39191642-39200116 chr19:38701002-38709476 126 nt 0.5476
hsa_ACTN4_0003700 Exon-Exon chr19:39191674-39195660 chr19:38701034-38705020 93 nt 0.5161
hsa_ACTN4_0004100 Exon-Exon chr19:39195574-39198835 chr19:38704934-38708195 167 nt 0.5329
hsa_ACTN4_0004400 Exon-Exon chr19:39196684-39200982 chr19:38706044-38710342 88 nt 0.5341
hsa_ACTN4_0004300 Exon-Exon chr19:39196684-39215205 chr19:38706044-38724565 1526 nt 0.5950
hsa_ACTN4_0004500 Intron-Intron chr19:39196915-39198535 chr19:38706275-38707895 1621 nt 0.5386
hsa_ACTN4_0004800 Intron-Exon-Intron chr19:39199216-39200116 chr19:38708576-38709476 901 nt 0.5860
hsa_chr19_0222500 Intergenic-Intergenic chr19:39200049-39212259 chr19:38709409-38721619 708 nt 0.5946
hsa_ACTN4_0005300 Exon-Exon chr19:39200926-39214362 chr19:38710286-38723722 57 nt 0.4912
Showing 61 to 70 of 114 entries
Forensic Context

A study in humans demonstrated that the circACTN4 recruits YBX1 to the FZD7 promoter, forming circRNA-protein-chromatin complexes to coactivate FZD7 transcription, identifying it as a biomarker for cancer [Misir et al. DOI:10.1038/s41418-022-00948-7].