Basic Information

Symbol
circACTN4
RNA Class
circRNA
Alias
Actinin Alpha 4 Focal Segmental Glomerulosclerosis 1 Non-Muscle Alpha-Actinin 4 Alpha-Actinin-4 FSGS1 ACTININ-4 FSGS
Location (GRCh37)
19:39110977-39221171 UCSC Genome Browser
Location (GRCh38)
19:38620337-38730531
UCSC Genome Browser Search in Marker Scope
Host gene
ACTN4
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_chr19_0222600 Intergenic-Intergenic chr19:39200940-39212205 chr19:38710300-38721565 136 nt 0.5588
hsa_ACTN4_0005400 Intron-Exon-Intron chr19:39201916-39214717 chr19:38711276-38724077 250 nt 0.4560
hsa_ACTN4_0005500 Intron-Exon-Intron chr19:39201916-39217743 chr19:38711276-38727103 257 nt 0.5409
hsa_chr19_0222700 Intergenic-Intergenic chr19:39204041-39204340 chr19:38713401-38713700 300 nt 0.6533
hsa_ACTN4_0005600 Intron-Exon-Intron chr19:39204349-39208714 chr19:38713709-38718074 84 nt 0.5119
hsa_chr19_0222800 Intergenic-Intergenic chr19:39204751-39205370 chr19:38714111-38714730 620 nt 0.6081
hsa_ACTN4_0005700 Exon-Exon chr19:39205109-39208714 chr19:38714469-38718074 93 nt 0.5806
hsa_ACTN4_0005800 Intron-Intron chr19:39206073-39206592 chr19:38715433-38715952 520 nt 0.4096
hsa_chr19_0222900 Intergenic-Intergenic chr19:39206794-39207058 chr19:38716154-38716418 265 nt 0.4642
hsa_ACTN4_0006100 Exon-Exon chr19:39207726-39207956 chr19:38717086-38717316 231 nt 0.6277
Showing 71 to 80 of 114 entries
Forensic Context

A study in humans demonstrated that the circACTN4 recruits YBX1 to the FZD7 promoter, forming circRNA-protein-chromatin complexes to coactivate FZD7 transcription, identifying it as a biomarker for cancer [Misir et al. DOI:10.1038/s41418-022-00948-7].