Basic Information

Symbol
circACTN4
RNA Class
circRNA
Alias
Actinin Alpha 4 Focal Segmental Glomerulosclerosis 1 Non-Muscle Alpha-Actinin 4 Alpha-Actinin-4 FSGS1 ACTININ-4 FSGS
Location (GRCh37)
19:39110977-39221171 UCSC Genome Browser
Location (GRCh38)
19:38620337-38730531
UCSC Genome Browser Search in Marker Scope
Host gene
ACTN4
Host category
mRNA
Forensic tag(s)
Other applications
External database
circbank

Transcripts

ID Type Location (GRCh37) Location (GRCh38) Length GC content
hsa_ACTN4_0006200 Exon-Exon chr19:39207726-39215205 chr19:38717086-38724565 1098 nt 0.6129
hsa_ACTN4_0006300 Exon-Exon chr19:39207765-39207956 chr19:38717125-38717316 192 nt 0.6146
hsa_ACTN4_0006500 Intron-Exon-Intron chr19:39208567-39208865 chr19:38717927-38718225 299 nt 0.6254
hsa_ACTN4_0006600 Exon-Exon chr19:39208609-39214717 chr19:38717969-38724077 257 nt 0.6304
hsa_ACTN4_0006700 Intron-Intron chr19:39209063-39209245 chr19:38718423-38718605 183 nt 0.5355
hsa_chr19_0223000 Intergenic-Intergenic chr19:39210801-39211285 chr19:38720161-38720645 485 nt 0.6227
hsa_chr19_0223100 Intergenic-Intergenic chr19:39211503-39211765 chr19:38720863-38721125 263 nt 0.5589
hsa_ACTN4_0006900 Exon-Exon chr19:39212178-39215205 chr19:38721538-38724565 719 nt 0.6078
hsa_ACTN4_0007000 Exon-Exon chr19:39212300-39215205 chr19:38721660-38724565 597 nt 0.6047
hsa_ACTN4_0007100 Exon-Exon chr19:39212300-39216543 chr19:38721660-38725903 29 nt 0.6207
Showing 81 to 90 of 114 entries
Forensic Context

A study in humans demonstrated that the circACTN4 recruits YBX1 to the FZD7 promoter, forming circRNA-protein-chromatin complexes to coactivate FZD7 transcription, identifying it as a biomarker for cancer [Misir et al. DOI:10.1038/s41418-022-00948-7].