Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_FGD4_0001000

RNA Class

transcript (circRNA)

Alias

hsa-FGD4_0076

Host gene

FGD4

Type of circRNA

Intron-Intron

Location (GRCh37)

12:32618242-32626677 UCSC (hg19)

Location (GRCh38)

12:32465308-32473743 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-24.92 kcal/mol

Thermodynamic ensemble

Free Energy: -30.40 kcal/mol

Frequency: 0.0001

Diversity: 52.86

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((.((...(((((((((...((((.......................................))))..)).))))))).)).))))).......................................................((.....)).(((((............(((.(((((...(((.............)))..))))).))).............)))))............

Thermodynamic Ensemble Prediction

.....(((((.((...((((({{{({..{{({,,..((.....,........,,..,..,,..,,......,}})...),))))))).)).))))).......................................................((.....}),(((((.,|.,,..........|{{|{.,..,{{,.....,{{....}},.,,}},.),}}}},.........}}}}}..........}}

Basic Information

Secondary Structure

Structure Prediction

Forensic Context