Basic Information
Symbol
hsa_AFF1_0011900
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0172
Host gene
AFF1
Type of circRNA
Exon-Exon
Location (GRCh37)
4:88029311-88048269
UCSC (hg19)
Location (GRCh38)
4:87108159-87127117
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-81.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-85.83 kcal/mol
Frequency:
0.0004
Diversity:
26.83
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((...(.(((((.........(((((....((((.........)))).((((((...........)))))).........(((((.(((.(.((((........(((.((.(...((...........)).))).)))......))))).))).)))))....................((((((((....(((((((((....))))))))))))))))))))))..))))).)...))))))(.(.(((((...)).)))...)...).
Thermodynamic Ensemble Prediction
((((((...{.(((((.........(((((....((((.........)))).((((((...........)))))).....,...(((((.(((.(.((((..{.{..,(((.{(.{...((........}..)).,)).))}...,..))))).))).)))))...................,((((((((....(((((((((....))))))))))))))))))))))..))))).,...)))))){.{.(((((...)).)))...,...,.
Forensic Context
No forensic context available.