Basic Information
Symbol
hsa_HDAC9_0011300
RNA Class
circRNA
Alias
hsa_circ_0001680
hsa_circHDAC9_005
hsa-HDAC9_0001
Host gene
HDAC9
Type of circRNA
Exon-Exon
Location (GRCh37)
7:18624904-18633652
UCSC (hg19)
Location (GRCh38)
7:18585281-18594029
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-160.6 kcal/mol
Thermodynamic ensemble
Free Energy:
-171.99 kcal/mol
Frequency:
0.0000
Diversity:
191.31
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.((..(.(((((((.....((((((((((.....))))))............(((.(((.....))).)))..(((((((...(((((((....(((((...((((((((.((((.(....).)))).)))))))).)))))(((((.......(((((.((.((((((((..(..((((((((.........)))).))))..)...((.((.((((..((.((((((((((....((..(((((.........................)))))..)).)))))......))))).))..)))).)).)).((((.......(((((((.((......))((........)).)))))))))))))))))))...................(((..(((((.......(((((.........)))))..((((((...((((.....))))....)).....))))......((((((.......))))))..)))))...)))..)))))))......)))))))))))).)))))))............(((((......))))).(((((...((((....(((.....))).)))).....)))))...))))))))))))..)).((......))
Thermodynamic Ensemble Prediction
{{{.,(,({{(({(,,,{{((((((((((,,,,.||}}}|,,...,,,....(((.(((.....))).))).,|{{{{((...(((((((...{(((((,..((((((((.((((.(....).)))).)))))))).}})))||||{.......{((({{({.{||||||,..,,.{{((((((,......,.))}}},||||.},,,||.||.||||},||.(({{({{(((....{{..{{{||..,,}}},}}},,.,},,,...,,,|},}}..}}.|||||.....,))))}.},..)))}.|}.|}.,.,|},,,...,((((({.,.{,,{{.||((........)).))))))|(((({,,...........})})},.......(((,,(({({..,{{{.{{{{{.,,{{....)))),..{{(({{...((((.....))))....},..,..}}}}......((((((.......)))))),|}|,}}...}}}..))))))),,,.,.)))))))}}}}}.}}}}}})||......,,,,(((((......))))).{{{{{...{(({....{{,.....},,.)))),,...}))))...,|||}}}}}))}..}}}},.....,})
Forensic Context
No forensic context available.