Basic Information
Symbol
hsa_chr4_0622600
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0126
Host gene
AFF1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
4:88048682-88052406
UCSC (hg19)
Location (GRCh38)
4:87127530-87131254
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-87.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-93.46 kcal/mol
Frequency:
0.0001
Diversity:
55.17
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((......(((((((.........((((..((((((..((...(((((.........)))))))))))))))))(((((((.(.((((((((((.....(((((.....))))).....)))))).)....)))).)))))))........).))))))......)))(.((.((..((((.(((.((((((((((((((((..(((.(((((((((..((((.((.(((.(((........)))..))).))))))...)))))))))..................((...........))..)))..)))))))))))..)).))).))).))))..)))).)
Thermodynamic Ensemble Prediction
(((......(((((((.......,{({{{..((((((..{(,,,({{{{.|,,,},},))))})}))))}}))))(((((((.(.((({((((((.....(((((.....))))).....)))))).)....)))).)))))))........),})))))......)))(.((.((..((((.(((.((((((((((((((((..(((.(((((((((..((((.{(.(((.(((.....,,,}))..}}}.))))))...))))))))),,................||||.........}}..)))..)))))))))),,})).))).))).))))..)))).)
Forensic Context
No forensic context available.