Basic Information
Symbol
hsa_chr9_0040100
RNA Class
transcript (circRNA)
Alias
hsa-ABCA1_0032
Host gene
ABCA1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
9:107588011-107588284
UCSC (hg19)
Location (GRCh38)
9:104825730-104826003
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-58.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-63.18 kcal/mol
Frequency:
0.0006
Diversity:
81.81
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.(...........(((((...((((((((.........)))).)))))))))..((((..((.....))..))))..((((.((((..((((((...........))))))...........((...........))....))))...))))((.((((.....))))))...).)))((((((((((..((..(((..(((..((((.......(((((.(((.....))))))))))))..)))..)))))))))))))........))
Thermodynamic Ensemble Prediction
(((,,.....||,,,.{((((...((((((((,,,,,.,..}}}}.)))}}}))}..(({(.,{,.....}}..))}}..{(({.{{{{..((((((...........))))))..{,.,,,||,{,...........||,...))})...)}})||,{|||,,,..))))}}...}.}}){{{(((((({..|||,|{{|.{((..(({{....,,,{((((,(((....,))))))))))))..})),,},}),})))))))........})
Forensic Context
No forensic context available.