Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_chr2_0615900

RNA Class

transcript (circRNA)

Alias

hsa-GIGYF2_0171

Host gene

GIGYF2

Type of circRNA

Intergenic-Intergenic

Location (GRCh37)

2:233566254-233566586 UCSC (hg19)

Location (GRCh38)

2:232701544-232701876 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-70.10 kcal/mol

Thermodynamic ensemble

Free Energy: -77.12 kcal/mol

Frequency: 0.0000

Diversity: 90.55

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((((((((.((((((((((.(((..((.............))..))).))).))))..))).))........(((......)))((..........))...........))))))))))).......((((....((.((((.(((((((......((.(((((((.....((((((....)))))).((....))(((.((.(((((((...((..(((((.......))))).))...)).))))).))))).......(((......)))((((....))))))))))).))......)))...)))).)))).))))))

Thermodynamic Ensemble Prediction

.....((((((((((({{.{(((((((((.(((..({.............})..))).))).))))..))).}},{..,||.{{{.....,}}}{{,,........},...........))))))))))),,.....((((....((.(((({(((((((......((.{((((((.....(((((,....|))))}.{|,,,,}}{{{.|{.((((({{...((..(((((.......))))).))...}}.))))).|}|}|,,,,...(({......})){{{|,,,,})))))))))).)).....,))),..}}}},))))}))))))

Basic Information

Secondary Structure

Structure Prediction

Forensic Context