Basic Information
Symbol
hsa_AFF1_0002300
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0090
Host gene
AFF1
Type of circRNA
Intron-Intron
Location (GRCh37)
4:87926409-87931963
UCSC (hg19)
Location (GRCh38)
4:87005257-87010811
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-37.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-41.46 kcal/mol
Frequency:
0.0007
Diversity:
37.51
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(.((........)).)((((((((.(((.(((((((...)))))))...)))...............(((((.......................))))).........................................................((((..((.(((((((((........((((............)))).........))))))))).))))))..............))))))))
Thermodynamic Ensemble Prediction
(.((,......})).)((((((((.,.,{(((((({,,,|||}}},..|{||.....,,,,...,..|||||,.....,,,,,,...........}}},,.....................................................,,....,|}.((.(((((((((......,.((((............)))),........))))))))).)),}}},,............))))))))
Forensic Context
No forensic context available.