Basic Information
Symbol
hsa_AFF1_0003300
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0105
Host gene
AFF1
Type of circRNA
Intron-Exon
Location (GRCh37)
4:87949663-87968834
UCSC (hg19)
Location (GRCh38)
4:87028511-87047682
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-38.07 kcal/mol
Thermodynamic ensemble
Free Energy:
-43.15 kcal/mol
Frequency:
0.0003
Diversity:
70.14
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(...(((((((((..........((....))..((((.......))))....((((((((.......(((((..(((((.....)))))))))).(((......................................................)))...)))))))).((((((((((((...))))))))))))(((((....))))))))))))))...).(((......(((...)))......))).
Thermodynamic Ensemble Prediction
{.{{((({,,((({,,,,,,...{{..,,)),,||||,,..,,.},,},}},,{,((((({{((({.{,{{{,.,{{,{..|,,,,,.((((...}))).....................................................{{{.,{|||||,,,.((((((((((({...}))))))))))),||||..}})}))}}}}}}}}}}..,|{(((...,}}|||...))))}))}})),.
Forensic Context
No forensic context available.