Basic Information
Symbol
hsa_chr4_0621000
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0103
Host gene
AFF1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
4:87954041-87954433
UCSC (hg19)
Location (GRCh38)
4:87032889-87033281
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-102.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-109.45 kcal/mol
Frequency:
0.0000
Diversity:
93.56
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(..(((((..((((((...............)))))).(((............)))(((((......(((.............)))(((...)))........((((.(((((.((((((........)))))).))))).)))).((((((((.......((((((((((((((.((....)))).)))))))...........))))).....)))))))))))))(((((....)))))((((((((......((......))......))))))))(((((((..........)))))))((((..((((((.(..(((.(((..(((.....)))))))))..))))))).))))..)))))..)((((.........)))......)
Thermodynamic Ensemble Prediction
(..(((((..((((((...............)))))){{{(.,..........}}}|((((,.....{((........,,...}}|(((,,,|}}........((((.{((((.((((((........)))))).))))),)))}.,((((({{.......((((((((((((((.((....)))).)))))))...........))))).....)))))))))))}}(((((....)))))((((((((......((......))...,.,)))))))){{{{{{{.{......}.}))))))((((..(((({{{(..(((.(((..({,.....,},))))))..))))))).))))..)))))..)((((.........)),.....})
Forensic Context
No forensic context available.