Basic Information
Symbol
hsa_AFF1_0004300
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0108
Host gene
AFF1
Type of circRNA
Exon-Exon
Location (GRCh37)
4:87967318-88057618
UCSC (hg19)
Location (GRCh38)
4:87046166-87136466
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-45.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-50.07 kcal/mol
Frequency:
0.0007
Diversity:
49.12
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((.(......))))))...(((((((((......((((((...(((.((...((((((((((...........).)))..))))))....................................................................((....)))))))..)))))).....((.(((((...))))).))..)))))))))(((((.((.(((.((.....)).))).)).)))))..
Thermodynamic Ensemble Prediction
(((((.,....,,}}|}},..,({(((((({..,,{.((((((...(((.((...((((((((({...........).)))..))))))....................................................................{{....||)))))..)))))).|||,((,(((((...})))).})..)))))))))|((((.((,{((.({.....)),))).)).)))),.,
Forensic Context
No forensic context available.