Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_HECTD1_0005800

RNA Class

transcript (circRNA)

Alias

hsa-HECTD1_0317

Host gene

HECTD1

Type of circRNA

Exon-Exon

Location (GRCh37)

14:31574796-31576910 UCSC (hg19)

Location (GRCh38)

14:31105590-31107704 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-52.30 kcal/mol

Thermodynamic ensemble

Free Energy: -55.10 kcal/mol

Frequency: 0.0106

Diversity: 28.06

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((............((((((((((((.((.(((((((((.....)))))))))(((((.(((..(((.........((((((((...(((.......((..(((((...((.((((((...))))))))..)))))..)).....))).)))).))))......)))..)).).))))))).))))))))).)))..)))))))...

Thermodynamic Ensemble Prediction

.....(((((((............((((((((((((.((.(((((((((.....)))))))))(((((.{((..(((.........((((((((...(((.....,,((,.(((((...{(.((((({...)))))))}..)))))..}}.....))).)))).))))......)))..)).}.))))))).)))))))))},))..)))))))...

Basic Information

Secondary Structure

Structure Prediction

Forensic Context