Basic Information
Symbol
hsa_ABCA1_0009000
RNA Class
transcript (circRNA)
Alias
hsa-ABCA1_0139
Host gene
ABCA1
Type of circRNA
Exon-Exon
Location (GRCh37)
9:107593304-107594068
UCSC (hg19)
Location (GRCh38)
9:104831023-104831787
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-71.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-77.03 kcal/mol
Frequency:
0.0001
Diversity:
76.45
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((((((.((.((((((..(((((.((........)).))))))))))).)).((((.(((..((((.....))))((((((.....))))))((((..((((((........(((....)))..))))))..)))).))).))))...........))))))..)))))(.(((((((((((((........)))))))))..((((...((((....)))).)))).......)))).)
Thermodynamic Ensemble Prediction
(((,,((((((..{.(((({...|{|||.,{.}}}}}}.)),}||||||}|},{||.{(((.(((.,((((.....))))|(((((.....)))))}((({,,(((((({..,,...,{{...,)})}.)))))).,)))).)}),))),...........|||||||...,,,|}||,,|||||{((({...{{{{||,||}|||....,}}.}.)),}}}}}}}},,,))},.},..))))})
Forensic Context
No forensic context available.