Basic Information
Symbol
hsa_PVT1_0001600
RNA Class
circRNA
Alias
hsa_circ_0001821
hsa_circTCONS_00015354_001
hsa-PVT1_0001
Host gene
PVT1
Type of circRNA
Exon-Exon
Location (GRCh37)
8:128902835-128903244
UCSC (hg19)
Location (GRCh38)
8:127890589-127890998
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-133.6 kcal/mol
Thermodynamic ensemble
Free Energy:
-141.01 kcal/mol
Frequency:
0.0000
Diversity:
117.29
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(....(((((((..((....))......)))))))...)((((((..(((...))).((((((((((.(...(((((((....((((((((((.(((((.(((((......))))))))).).)).))))))))...((((((........)))))).......((.(((((((.(.((((..((.((((....)))).))..))))))))).)))))....(((((((((((((........))).)))))))))))))))))..))))))))))).(((..(((.(((((((..(....)..))))))).)))..))).....((((((..(........)..))))))........((((((..(((.((.((((.......)))).)).)))..))))))))))))
Thermodynamic Ensemble Prediction
(....(((((((..((....))......)))))))...)((((((.,((({{,|||.((((((((((.(,..(((((((,..{((((((((((.(((((.(((((......))))})))).).)).)))))))}.},{{{{{|,,.}}}},)}}}}}.....,.{{.(((((((.{.((({,{{,.{({,..,,))}),}}..}}}}})))).))},,....(((((((((((((........))).)))))))))))))))))..))))))))))).(((.,(((.(((((((..(....)..))))))).)))..}}}.....((({{{}}|.,,{{{{{|{.,}|||}.{{..,,}|,,|||,.,(({{,.,||}}}}}}}))))|,|||}}..,))))},))))))
Forensic Context
No forensic context available.