Basic Information
Symbol
hsa_AFF1_0007700
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0043
Host gene
AFF1
Type of circRNA
Exon-Exon
Location (GRCh37)
4:88005275-88011222
UCSC (hg19)
Location (GRCh38)
4:87084123-87090070
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-48.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-55.35 kcal/mol
Frequency:
0.0000
Diversity:
60.63
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
........(((((.....)))))....((((((.(((((........)))))...))))))(((((..(((.........))).)))))...((((......))))(((((((..(((.((...((((((((((((......(((......))).......)))))))...((((.....))))..(((.((.(.((((........)))).))).))))))))...((((..(((.........)))..))))..........))))).)))))))......
Thermodynamic Ensemble Prediction
.....,..(((((.....))))).|..((((((.(((((........)))))...)))))){((((..({{.{,......})).))))}...((((......))))(((((((..({{,{{.{{((((((((((((......(((......))).......))))))},,.((((.....)))).,|((.{,.({((((.,,...,,)))).))}.)))))))}})}((((..(((.......,.)))..)))).,,.......}}}),.))))))).,,..,
Forensic Context
No forensic context available.