Basic Information
Symbol
hsa_AFF1_0007800
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0022
Host gene
AFF1
Type of circRNA
Exon-Exon
Location (GRCh37)
4:88005275-88012981
UCSC (hg19)
Location (GRCh38)
4:87084123-87091829
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-57.30 kcal/mol
Thermodynamic ensemble
Free Energy:
-65.17 kcal/mol
Frequency:
0.0000
Diversity:
95.40
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
........(((((.....)))))....((((((.(((((........)))))...))))))(((((..(((.........))).))))).(((((....((.((((((((........(((.((((((((((((((......(((......))).......)))))))...((((.....))))..(((.((.(.((((........)))).))).)))))).))))..)))........((.((((...)))).))..........((((((......))))))))))))))...))....))))).............
Thermodynamic Ensemble Prediction
{{..{{..,,,((,{{{{|,|||{|..((((((.(((((........)))))...}))))){((((..{{{.{,......})}.)))}}.,,((({...,,.||||{((({{{..{,,,{{.{{((((((((((((......(((......))).......))))))},,.((((.....)))).,|((.{,.{{((((,,,...,,)))).))}.))))))}}})}{{{|..{{{.........))}..)))).|,.......},,||{|||,,,},})),))))),))),,..}),.}){,|||..........,,.,
Forensic Context
No forensic context available.