Basic Information
Symbol
hsa_AFF1_0010900
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0143
Host gene
AFF1
Type of circRNA
Exon-Exon
Location (GRCh37)
4:88026780-88048855
UCSC (hg19)
Location (GRCh38)
4:87105628-87127703
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-60.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-64.42 kcal/mol
Frequency:
0.0017
Diversity:
34.89
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(..(((.((((.....)))))))...(((.(((((((((..((........))........(((....)))..)))))).))))))((((..(((....)))))))...((((..(((.((((....((((((..(((((....)))))((((.....))))...(((((.((((((((((.(.........))))).)))))).))))))))))))))).)))...))))...)((.......))
Thermodynamic Ensemble Prediction
(..(((.((((.....)))))))...(((.(((((((((..{{.....{............{{{....)))..)))))).))))))((((..(((....)))))))...((((..{((.((((....((((((..(((((....})}},{{{{.....))))...(((((.((((((((((.{.........})))),,))))).))))))))))),}))}))}...))))...)((.......))
Forensic Context
No forensic context available.