Basic Information
Symbol
hsa_AFF1_0013000
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0042
Host gene
AFF1
Type of circRNA
Exon-Exon
Location (GRCh37)
4:88035519-88048855
UCSC (hg19)
Location (GRCh38)
4:87114367-87127703
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-34.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-37.14 kcal/mol
Frequency:
0.0073
Diversity:
19.26
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((....))((..(((.((((.....((((((...((((((..(((((....)))))((((.....))))...(((((.((((((((((.(.........))))).)))))).))))))))))).....)).))))......)))).)))..))
Thermodynamic Ensemble Prediction
((....))((..(((.((((...{.(((({{...((((((..(((((....||}},{{{{.....))))...(((((.((((((((((.{.........})))),,))))).))))))))))).....)}.))))......)))).)))..))
Forensic Context
No forensic context available.