Basic Information
Symbol
hsa_AFF1_0013500
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0149
Host gene
AFF1
Type of circRNA
Exon-Exon
Location (GRCh37)
4:88046189-88048855
UCSC (hg19)
Location (GRCh38)
4:87125037-87127703
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-28.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-31.51 kcal/mol
Frequency:
0.0075
Diversity:
20.13
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((.(..(((((((((((((..........((........))..........))))))))).))))..))))))))(....((..(((....)))...............((...(((((....)))))..))............((.....))...))....)
Thermodynamic Ensemble Prediction
(((((((..(,(((((((((((((..........((......,,,,..........))))))))).)))))..)))))))(.....,..{({....}}}...............((...(((((....)))))..))........,...((.....))...}}....)
Forensic Context
No forensic context available.