Basic Information
Symbol
hsa_chr4_0622700
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0117
Host gene
AFF1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
4:88053542-88056848
UCSC (hg19)
Location (GRCh38)
4:87132390-87135696
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-121.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-126.43 kcal/mol
Frequency:
0.0002
Diversity:
88.48
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(.((((((((((.......)))))....))))))((.((((((((.(((((((.(((((....(((....)))..)))))..)))))))...((((((...))))))..((((((.....))))))(((....)))((((.(((((........)))))..)))).(((((((((((((........(((((((......)))))))(((((((.......)))))))(((......))).((((((((.((..((((((...((((..(.((((.((((..((....))..)))))))).)..)))).)))))).)).)))).))))...)))))).))))))).))))))))...))
Thermodynamic Ensemble Prediction
(.((((((((,........,},,,)}},))))))((.((((((((.(((((((.(((((..,,(((....))),.)))))..)))))))...,{{(((...)))|||..((((((.....)))))){||,...}})((({.(((((........}))))..}))).(({((((((({({,,.,,{,.(((((((......))))))),,|||{,.,.,,.})}}}}}|{|{...,.,||||((((((((.((..((((((...((((..(.((((.((((..((....))..)))))))).)..)))).)))))).)).)))).)))).,,))}}}),}})}})).))))))))...))
Forensic Context
No forensic context available.