Basic Information
Symbol
hsa_chr4_0623000
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0115
Host gene
AFF1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
4:88056638-88056848
UCSC (hg19)
Location (GRCh38)
4:87135486-87135696
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-35.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-40.59 kcal/mol
Frequency:
0.0004
Diversity:
52.83
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((((.(((((((.((((...((((((........))((((((.(((((((.(((((....(((....)))..)))))..)))))))..((((.((((......))))..))))....................................)))))).))))...)))).)))))..)).))))))....(((.........))).....
Thermodynamic Ensemble Prediction
(,((((({(({,,,..,{{{...||||,|,,,}}{{{||(((({,.(((((((.(((((..,.(((....))),.)))))..)))))))..,{{(,((((......}|}}..,.....,},...........................},..,}))}).}))),..}}...........{(({|,{..........,.,)))}...,}},}
Forensic Context
No forensic context available.